I opened up the boxes and installed several of the little odds and ends today.
The BMC air filter is a straight replacement of the (mildly dirty) stock one.
The air injection block-off plate is a simple bolt-on, and a cap for the fitting on the airbox that normally connects to the hose for the air injection. I taped over the electrical connector to protect it in case it ever needs to be hooked up again.
The side-stand elimination kit is simply a jumpered plug that takes the place of the side-stand connector. Yeah, lots of people just cut the wire and twist them together ... and then have issues with loose connections later, and doing it this way keeps the stock stuff intact in case it ever goes back to being a street bike. Getting to that plug requires removing the sprocket cover and coolant bottle (which means the bodywork has to be off, but it already is). While in there, I installed the oxygen sensor block-off plug that came with the Power Commander, since that connector is in the same bundle.
The clutch switch kit is another jumpered plug that replaces the left handlebar switches, which are otherwise all lighting and horn - not needed on a race bike, except the jumper for the clutch switch allows the bike to be started in gear.
The steering stop is a simple bolt-on that attaches where the horn normally goes, on the lower triple clamp. This is to improve clearance for clip-on handlebars. It reduces steering travel by about a third. Race bikes tend to have big turning circles - don't need much steer angle on track.
The Tightails upper fairing bracket replaces the stock one, eliminates the part of the bracket normally used for the headlight, and allows the instrument panel to be mounted deeper into the fairing, which improves clearance for clip-on handlebars. It's made of aluminum and weighs a fraction of what the stock one does. Easy replacement, although I had to dig up a couple of 8mm nuts, and I'm going to have to make something to hold my air/fuel gauge.
Next up: PowerCommander, the ignition switch delete kit (which will be modified to supply power to the air/fuel gauge), the keyless fuel filler cap, reinstall the fuel tank, then I'll test-fire it to confirm that the electrical system works ... then swap to the reflashed ECU and see what happens.