The OP is winterizing the bike, so, it's not a good idea to run the engine after changing the oil because it will contaminate the new oil. The reason for changing oil just before winterizing is to prevent the old oil from ruining the aluminum block. Oil chemistry changes over periods of extended storage. Old oil can develop acidic qualities, which can corrode engine parts. Just leave the bike alone after changing the oil. If you need to adjust the level, do so in the spring.
If you don't run the bike after the oil change the oil filter will remain empty all winter. Come spring time when you do go to start the bike, the oil pump will have to fill the filter first before any oil gets sent to the rest of the motor. Do you think that will be good for it?
I ALWAYS run the bike before draining the oil to make sure all bearings and lifters and such are lubricated. Drain the oil, replace filter, fill oil, then start the bike again to make sure the oil system is primed.